[195 residues]
Trusted matches - domains scoring higher than the gathering threshold (A)

DomainStartEndBitsEvalueAlignment Mode
IL642190268.601.1e-77Align ls



Potential matches - Domains with Evalues above the cutoff

DomainStartEndBitsEvalueAlignment Mode
IL114191-57.800.57Align ls
CART33393.300.73Align fs



Alignments of Pfam-A domains to HMMs

Format for fetching alignments to seed

Alignment of IL6 vs UNKNOWN-QUERY/42-190

                   *->irkIlgkisaLrkelCdkyklCeneeeaLaennLnLPkaaekDgCfq
                      +rkI++++++L+++lC+++klC++ee++L++++L++P+a ++++C++
  UNKNOWN-QU    42    VRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQA-PLSSCSS 87   

                   sGfnqetCLtqittGLleYqiyLeyLqneyeenkenvrtLqldtatLiqi
                   +++++++CL+q+++GL++Yq++L++L+++++e++++++tLqld+++++++
  UNKNOWN-QU    88 QSLQLTSCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATN 137  

                   lkqkmkdldkittpaPatnatllaklqsqnewlrragivLiLrsLeeFLe
                   ++ +m+d    +++aPa+++t++a+++++++++rrag+vL++++L++FLe
  UNKNOWN-QU   138 IWLQMED----LGAAPAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLE 183  

                   fslRAlR<-*
                   +++R+lR   
  UNKNOWN-QU   184 LAYRGLR    190  

Alignment of IL11 vs UNKNOWN-QUERY/4-191

                   *->mnCvCRLvLvvLsLWPDtavAPGPPaGsPRvspDPRAeLDstvLLtR
                         v  L L   +LW    v    P G+ R  + P   L       R
  UNKNOWN-QU     4    --MVLQLLLWHSALW---TVHEATPLGPAR--SLPQSFLLKCLEQVR 43   

                   sLLaDtRqLaaql....rDKFPADGDHnLDsL..PtLAmsAGaLGaLqLP
                    + aD   L   l   ++   P +      sL+ P   +s  +  +LqL 
  UNKNOWN-QU    44 KIQADGAELQERLcaahKLCHPEELMLLRHSLgiPQAPLSSCSSQSLQLT 93   

                   gvLtRLRaDLlsYLRHvqWLRRAgGssLKtLEPELGtLqaRLdRLLRRLq
                   + L  L   L+ Y    q L  A       L P L tLq  +      + 
  UNKNOWN-QU    94 SCLNQLHGGLFLY----QGLLQALAGISPELAPTLDTLQLDVTDFATNIW 139  

                   LLmsRL.ALPqaaPDpPaiPLaPPssaWGgiRAAHAiLGGLHLtLDWAvR
                   L m  L+A P + P + a+P    +sa+        +   LH  L+ A R
  UNKNOWN-QU   140 LQMEDLgAAPAVQPTQGAMPTF--TSAFQRRAGGVLVASQLHRFLELAYR 187  

                   GLLLLKtRL<-*
                   GL     R    
  UNKNOWN-QU   188 GL-----RY    191  

Alignment of CART vs UNKNOWN-QUERY/33-39

                   *->yFLLKCL<-*
                      +FLLKCL   
  UNKNOWN-QU    33    SFLLKCL    39